BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D06LP1|AL425851
(807 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1133 1592 0.0
>3x_Contig1133
Length = 4723
Score = 1592 bits (803), Expect = 0.0
Identities = 806/807 (99%)
Strand = Plus / Plus
Query: 1 accgtatattgaatcatccatgtgcaggttcaagcaattgacagccagatgttctaaatg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2824 accgtatattgaatcatccatgtgcaggttcaagcaattgacagcaagatgttctaaatg 2883
Query: 61 cgagaagttgcaaaatcaagaatacgaaagcatagtcagaaatttaccacctttactttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2884 cgagaagttgcaaaatcaagaatacgaaagcatagtcagaaatttaccacctttactttc 2943
Query: 121 actcaatatttgtttgtcaccagaagaatggacaactgctaaaactgttaatggatggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2944 actcaatatttgtttgtcaccagaagaatggacaactgctaaaactgttaatggatggtt 3003
Query: 181 gtcaaaccacttttttgccacaatctctaaggatagacccatcttgaaacttcaggccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3004 gtcaaaccacttttttgccacaatctctaaggatagacccatcttgaaacttcaggccac 3063
Query: 241 tgacctcaagacgtctaatgctatcttcaagtacgaattaatgtcctatgtcgcaagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3064 tgacctcaagacgtctaatgctatcttcaagtacgaattaatgtcctatgtcgcaagaat 3123
Query: 301 cacagacgatttcggtgaggagcatttggtcacgtacgctaagatcttggatcagaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3124 cacagacgatttcggtgaggagcatttggtcacgtacgctaagatcttggatcagaaaat 3183
Query: 361 acaacagtacaagtggtacatgtttaatgactttttggtacaagaaattgatgaggatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3184 acaacagtacaagtggtacatgtttaatgactttttggtacaagaaattgatgaggatga 3243
Query: 421 ggctttaaatatttcgtactggtggaaaacaccagaaattgttgtttattctgatgcgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3244 ggctttaaatatttcgtactggtggaaaacaccagaaattgttgtttattctgatgcgga 3303
Query: 481 agaaatcagaaagccatttgtttcagtttcgaaattaaaggttgacacagacatcctata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3304 agaaatcagaaagccatttgtttcagtttcgaaattaaaggttgacacagacatcctata 3363
Query: 541 tcgtgactatttcagtgagggcattagaaaagacgtgataagacaatacagactattgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3364 tcgtgactatttcagtgagggcattagaaaagacgtgataagacaatacagactattgac 3423
Query: 601 taaagatgaagcaccaggaccgggcaccttagttgccttggacgcggaattcgtgtcttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3424 taaagatgaagcaccaggaccgggcaccttagttgccttggacgcggaattcgtgtcttt 3483
Query: 661 gacagaaccgtacttggaaatcaattgtaaaggtatgaaaaccttgcttaaaccagctaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3484 gacagaaccgtacttggaaatcaattgtaaaggtatgaaaaccttgcttaaaccagctaa 3543
Query: 721 gaagtctttggctcgtgtatctttgttgagaggtgaaggtgagttggaaggtgttccatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3544 gaagtctttggctcgtgtatctttgttgagaggtgaaggtgagttggaaggtgttccatt 3603
Query: 781 cattgatgactatattataaatgagtg 807
|||||||||||||||||||||||||||
Sbjct: 3604 cattgatgactatattataaatgagtg 3630
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6313
Number of Sequences: 1807
Number of extensions: 6313
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 807
length of database: 10,358,551
effective HSP length: 16
effective length of query: 791
effective length of database: 10,329,639
effective search space: 8170744449
effective search space used: 8170744449
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)